STRINGSTRING
BPSL1623 BPSL1623 BPSL1624 BPSL1624
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL1623Subfamily S9C non-peptidase homologue; Similar to Rhizobium loti polyhydroxybutyrate depolymerase mlr2444 SWALL:Q98IE0 (EMBL:AP002999) (371 aa) fasta scores: E(): 5.5e-17, 30.51% id in 331 aa, and to Alcaligenes faecalis poly(3-hydroxybutyrate) depolymerase precursor (EC 3.1.1.75) (PHB depolymerase) SWALL:PHB_ALCFA (SWALL:P12625) (488 aa) fasta scores: E(): 7.9e-08, 27.11% id in 295 aa. (362 aa)    
Predicted Functional Partners:
BPSL1624
Hypothetical protein; No significant database matches.
       0.409
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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